| ### | ASSEMBLY | PARAM | SPECIES | GENOTYPE | LIBRARY | #_of_ESTs | CONTIGS | SINGLETS | UNIGENES | GROUPS | EST/UNI | UNI/GRP | LENGTH | ATH_HITS% | COMMENTS | DOWNLOAD_ESTs | DOWNLOAD_ASSEMBLY | DOWNLOAD_CLUST_INFO | DOWNLOAD_GROUP_INFO | ATH_BLAST_INFO_BEST_HIT | GO STAT |
| 000 | L0_CDS_Contig# | 80-90 | lettuce | L.sativa L.serriola | QG(ABCDI) QG(EFGHJ) CLS(XYZ) CLR(XYZ) | 49376 | 8006 | 9559 | 17565 | 15209 | 2.81 | 1.15 | 565 | 95.34 | assembly of CDS regions only | L0_CDS_ESTs_Sat_Ser.fasta | L0_CDS_ESTs_Sat_Ser.assembly | L0_CDS_ESTs_Sat_Ser.cluster | L0_CDS_ESTs_Sat_Ser.group | L0_CDS_ESTs_Sat_Ser.BlastX.vs.ath_ncbi_v4a_prot.info1 | L0_CDS_ESTs_Sat_Ser |
| 001 | L1_CDS_Contig# | 80-90 | lettuce | L.sativa L.serriola L.saligna L.perennis L.virosa | QG(ABCDI) QG(EFGHJ) CLS(XYZ) CLR(XYZ) CLL(XYZ) CLP(XYZ) CLV(XYZ) | 89773 | 12795 | 12000 | 24795 | 19270 | 3.62 | 1.29 | 587 | 94.84 | assembly of CDS regions only | L1_CDS_ESTs_5XLet.fasta | L1_CDS_ESTs_5XLet.assembly | L1_CDS_ESTs_5XLet.cluster | L1_CDS_ESTs_5XLet.group | L1_CDS_ESTs_5XLet.BlastX.vs.ath_ncbi_v4a_prot.info1 | L1_CDS_ESTs_5XLet |
| 002 | L2_CDS_Contig# | 80-90 | lettuce | L.sativa L.serriola L.saligna L.perennis L.virosa | QG(ABCDI) QG(EFGHJ) CLS(XYZ) CLS(LMS) CLR(XYZ) CLL(XYZ) CLP(XYZ) CLV(XYZ) | 102697 | 14221 | 11388 | 25609 | 19408 | 4.01 | 1.32 | 636 | 98.02 | assembly of CDS regions only | L2_CDS_ESTs_5XLet.fasta | L2_CDS_ESTs_5XLet.assembly | L2_CDS_ESTs_5XLet.cluster | L2_CDS_ESTs_5XLet.group | L2_CDS_ESTs_5XLet.BlastX.vs.ath_ncbi_v4a_prot.info1 | L2_CDS_ESTs_5XLet |
| 003 | CLS_M1_Contig# | 80-90 | lettuce | L.sativa | QG(ABCDI) CLS(XYZ) | 50156 | 7358 | 11397 | 18755 | 15310 | 2.67 | 1.23 | 683 | 72.11 | standard library only | CLS_M1_ESTs_Sat.fasta | CLS_M1_ESTs_Sat.assembly | CLS_M1_ESTs_Sat.cluster | CLS_M1_ESTs_Sat.group | CLS_M1_ESTs_Sat.BlastX.vs.ath_ncbi_v4a_prot.info1 | CLS_M1_ESTs_Sat |
| 004 | CLR_M1_Contig# | 80-90 | lettuce | L.serriola | QG(EFGHJ) CLR(XYZ) | 52034 | 7544 | 12509 | 20053 | 16453 | 2.59 | 1.22 | 701 | 73.26 | ---- | CLR_M1_ESTs_Ser.fasta | CLR_M1_ESTs_Ser.assembly | CLR_M1_ESTs_Ser.cluster | CLR_M1_ESTs_Ser.group | CLR_M1_ESTs_Ser.BlastX.vs.ath_ncbi_v4a_prot.info1 | CLR_M1_ESTs_Ser |
| 005 | CLL_M1_Contig# | 80-90 | lettuce | L.saligna | CLL(XYZ) | 28851 | 5053 | 6475 | 11528 | 9510 | 2.5 | 1.21 | 772 | 80.79 | ---- | CLL_M1_ESTs_Sal.fasta | CLL_M1_ESTs_Sal.assembly | CLL_M1_ESTs_Sal.cluster | CLL_M1_ESTs_Sal.group | CLL_M1_ESTs_Sal.BlastX.vs.ath_ncbi_v4a_prot.info1 | CLL_M1_ESTs_Sal |
| 006 | CLP_M1_Contig# | 80-90 | lettuce | L.perennis | CLP(XYZ) | 28066 | 4751 | 7102 | 11853 | 9396 | 2.37 | 1.26 | 753 | 76.59 | ---- | CLP_M1_ESTs_Per.fasta | CLP_M1_ESTs_Per.assembly | CLP_M1_ESTs_Per.cluster | CLP_M1_ESTs_Per.group | CLP_M1_ESTs_Per.BlastX.vs.ath_ncbi_v4a_prot.info1 | CLP_M1_ESTs_Per |
| 007 | CLV_M1_Contig# | 80-90 | lettuce | L.virosa | CLV(XYZ) | 28335 | 4977 | 7209 | 12186 | 9859 | 2.33 | 1.24 | 744 | 74.66 | ---- | CLV_M1_ESTs_Vir.fasta | CLV_M1_ESTs_Vir.assembly | CLV_M1_ESTs_Vir.cluster | CLV_M1_ESTs_Vir.group | CLV_M1_ESTs_Vir.BlastX.vs.ath_ncbi_v4a_prot.info1 | CLV_M1_ESTs_Vir |
| 008 | CLX_M1_Contig# | 80-90 | lettuce | L.sativa L.serriola L.saligna L.perennis L.virosa | CLS_M1 CLR_M1 CLL_M1 CLP_M1 CLV_M1 | 74375 | 10803 | 49450 | 60253 | 30059 | 1.23 | 2.01 | 764 | 73.42 | assembly of the assemblies | CLX_M1_ESTs_5XL.fasta | CLX_M1_ESTs_5XL.assembly | CLX_M1_ESTs_5XL.cluster | CLX_M1_ESTs_5XL.group | CLX_M1_ESTs_5XL.BlastX.vs.ath_ncbi_v4a_prot.info1 | CLX_M1_ESTs_5XL |
| 009 | CTO_M1_Contig# | 80-90 | dandelion | Taraxacum officinale | CTO(XYZ) | 39588 | 6498 | 10169 | 16667 | 12361 | 2.38 | 1.34 | 739 | H/N | ---- | CTO_M1_ESTs_Dan.fasta | CTO_M1_ESTs_Dan.assembly | CTO_M1_ESTs_Dan.cluster | CTO_M1_ESTs_Dan.group | CTO_M1_ESTs_Dan.BlastX.vs.ath_ncbi_v4a_prot.info1 | CTO_M1_ESTs_Dan |
| 010 | CHA_M2_Contig# | 80-90 | sunflower | Helianthus annuus | QH(ABCDI) QH(EFGHJ) CHA(XYZ) NCBI_ESTs | 86398 | 11053 | 21654 | 32707 | 22418 | 2.64 | 1.46 | 583 | H/N | assembly represented by several different strains | CHA_M2_ESTs_Ann.fasta | CHA_M2_ESTs_Ann.assembly | CHA_M2_ESTs_Ann.cluster | CHA_M2_ESTs_Ann.group | CHA_M2_ESTs_Ann.BlastX.vs.ath_ncbi_v4a_prot.info1 | CHA_M2_ESTs_Ann |
| 011 | CHP_M1_Contig# | 80-90 | sunflower | Helianthus petiolaris | CHP(XYZ) | 26808 | 4555 | 9719 | 14274 | 10504 | 1.88 | 1.36 | 727 | H/N | ---- | CHP_M1_ESTs_Pet.fasta | CHP_M1_ESTs_Pet.assembly | CHP_M1_ESTs_Pet.cluster | CHP_M1_ESTs_Pet.group | CHP_M1_ESTs_Pet.BlastX.vs.ath_ncbi_v4a_prot.info1 | CHP_M1_ESTs_Pet |
| 012 | CHT_M1_Contig# | 80-90 | J.artichoke | Helianthus tuberosus | CHT(LMS) | 19139 | 2926 | 11863 | 14789 | 10637 | 1.29 | 1.39 | 830 | H/N | non-complete set of ESTs (see assembly #013) | CHT_M1_ESTs_Tub.fasta | CHT_M1_ESTs_Tub.assembly | CHT_M1_ESTs_Tub.cluster | CHT_M1_ESTs_Tub.group | CHT_M1_ESTs_Tub.BlastX.vs.ath_ncbi_v4a_prot.info1 | CHT_M1_ESTs_Tub |
| 013 | CHT_M2_Contig# | 80-90 | J.artichoke | Helianthus tuberosus | CHT(LMS) | 0 | 0 | 0 | 0 | -1 | -1 | -1 | 0 | H/N | complete set (in progress) | ||||||
| 014a | CLS_S3_Contig# | 100-95 | lettuce | Lactuca sativa | QG(ABCDI) CLS(XYZ) CLS(LMS) | 76043 | 11455 | 17962 | 29417 | 22657 | 2.56 | 1.3 | 740 | NA | stringent cap3 conditions | CLS_S3_ESTs_Sat.fasta | CLS_S3_ESTs_Sat.assembly | CLS_S3_ESTs_Sat.cluster | CLS_S3_ESTs_Sat.group | CLS_S3_ESTs_Sat.BlastX.vs.ath_ncbi_v4a_prot.info1 | CLS_S3_ESTs_Sat |
| 014b | CLS_M3_Contig# | 80-90 | lettuce | Lactuca sativa | QG(ABCDI) CLS(XYZ) CLS(LMS) | 76043 | 11567 | 15481 | 27048 | -1 | 2.81 | -1 | 0 | H/N | medium cap3 conditions | CLS_M3_ESTs_Sat.fasta | CLS_M3_ESTs_Sat.assembly | CLS_M3_ESTs_Sat.cluster | CLS_M3_ESTs_Sat.BlastX.vs.ath_ncbi_v4a_prot.info1 | CLS_M3_ESTs_Sat | |
| 015 | CLR_S1_Contig# | 100-95 | lettuce | Lactuca serriola | QG(EFGHJ) CLR(XYZ) | 52034 | 7355 | 14972 | 22327 | 16643 | 2.33 | 1.34 | 0 | H/N | stringent cap3 conditions | CLR_S1_ESTs_Ser.fasta | CLR_S1_ESTs_Ser.assembly | CLR_S1_ESTs_Ser.cluster | CLR_S1_ESTs_Ser.group | CLR_S1_ESTs_Ser.BlastX.vs.ath_ncbi_v4a_prot.info1 | CLR_S1_ESTs_Ser |
| 016 | CLL_S1_Contig# | 100-95 | lettuce | Lactuca saligna | CLL(XYZ) | 28851 | 4977 | 7013 | 11990 | 9536 | 2.41 | 1.26 | 0 | 80.63 | stringent cap3 conditions | CLL_S1_ESTs_Sal.fasta | CLL_S1_ESTs_Sal.assembly | CLL_S1_ESTs_Sal.cluster | CLL_S1_ESTs_Sal.group | CLL_S1_ESTs_Sal.BlastX.vs.ath_ncbi_v4a_prot.info1 | CLL_S1_ESTs_Sal |
| 017 | CLP_S1_Contig# | 100-95 | lettuce | Lactuca perennis | CLP(XYZ) | 28066 | 4601 | 8060 | 12661 | 9435 | 2.22 | 1.34 | 0 | 76.29 | stringent cap3 conditions | CLP_S1_ESTs_Per.fasta | CLP_S1_ESTs_Per.assembly | CLP_S1_ESTs_Per.cluster | CLP_S1_ESTs_Per.group | CLP_S1_ESTs_Per.BlastX.vs.ath_ncbi_v4a_prot.info1 | CLP_S1_ESTs_Per |
| 018 | CLV_S1_Contig# | 100-95 | lettuce | Lactuca virosa | CLV(XYZ) | 28335 | 4903 | 7830 | 12733 | 9913 | 2.23 | 1.28 | 0 | 74.26 | stringent cap3 conditions | CLV_S1_ESTs_Vir.fasta | CLV_S1_ESTs_Vir.assembly | CLV_S1_ESTs_Vir.cluster | CLV_S1_ESTs_Vir.group | CLV_S1_ESTs_Vir.BlastX.vs.ath_ncbi_v4a_prot.info1 | CLV_S1_ESTs_Vir |
| 019 | CLX_S3_Contig# | 100-95 | lettuce | L.sativa L.serriola | QG(ABCDI) CLS(XYZ) CLS(LMS) QG(EFGHJ) CLR(XYZ) CLS_S3_Contig# | 128077 | 16212 | 26343 | 42555 | -1 | -1 | -1 | 0 | H/N | cap3 stringent conditions: custom assembly of two genotypes [sativa & serriola] for SNP discovery | CLX_S3_ESTs_2XL.fasta | CLX_S3_ESTs_2XL.assembly | CLX_S3_ESTs_2XL.cluster | CLX_S3_ESTs_2XL.BlastX.vs.ath_ncbi_v4a_prot.info1 | CLX_S3_ESTs_2XL | |
| 020 | CLX_S5_Contig# | 100-95 | lettuce | L.sativa L.serriola L.saligna L.perennis L.virosa | CLS_S3 CLR_S1 CLL_S1 CLP_S1 CLV_S1 | 0 | 0 | 0 | 0 | -1 | -1 | -1 | 0 | H/N | assembly of the assemblies [stringent conditions] | ||||||
| 021 | CHW_M1_Contig# | 80-90 | sunflower | Helianthus argophyllus | CHW(LMS) | 0 | 0 | 0 | 0 | -1 | -1 | -1 | 0 | H/N | ---- | ||||||
| 022 | CHE_M1_Contig# | 80-90 | sunflower | Helianthus exilis | CHE(LMS) | 0 | 0 | 0 | 0 | -1 | -1 | -1 | 0 | H/N | ---- | ||||||
| 023 | CCI_M1_Contig# | 80-90 | chicory | Cichorium intybus | CCI(LMS) | 38237 | 7115 | 15173 | 22288 | -1 | 1.72 | -1 | 790 | H/N | medium cap3 conditions | CCI_M1_ESTs_Int.fasta | CCI_M1_ESTs_Int.assembly | CCI_M1_ESTs_Int.cluster | CCI_M1_ESTs_Int.BlastX.vs.ath_ncbi_v4a_prot.info1 | CCI_M1_ESTs_Int |