Python Contig Viewer

Py_ContigViewer_Uni_2007_03_19_beta.py - Python Contig Viewer
tcl_blast_parser_123_V025S.tcl

to use Python Contig Viewer you need to download two files above and install Python and Tcl/Tk interpreters
general instructions how to use it at: cgpdb.ucdavis.edu/SNP_Discovery/Py_ContigViewer/Py_ContigViewer.html

Current 'beta' version provides viewing the following assemblies:

HELI_7CDS.CSA1 (Contig range: 1 - 17041) - assembly of seven different Helianthus spp.

LACT_5CDS.CSA1 (Contig range: 1 - 13129) - assembly of five different Lactuca spp.

LACT_2CDS.CSA1 (Contig range: 1 - 9520) - L.sativa X L.serriola assembly for SNP discovery

AST_12CDS.CSA1 (Contig range: 1 - 28238) seven Helianthus + five Lactuca spp.

Examples of queries and output: