COMPOSITAE (ASTERACEAE) EST ASSEMBLY INFO

Compositae (Asteraceae) EST Assembly Info:

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ASSEMBLY_ID		HELI_ANNU.CSA1	HELI_ARGO.CSA1	HELI_CILI.CSA1	HELI_EXIL.CSA1	HELI_PARA.CSA1	HELI_PETI.CSA1	HELI_TUBE.CSA1	HELI_07XM.CSA1	HELI_7CDS.CSA1
ASMBL_TYPE		mono spec	mono spec	mono spec	mono spec	mono spec	mono spec	mono spec	multi spec	multi spec
SPECIES	GENUS	Helianthus	Helianthus	Helianthus	Helianthus	Helianthus	Helianthus	Helianthus	Helianthus	Helianthus
SPECIES	EPITHET	annuus	argophyllus	ciliaris	exilis	paradoxus	petiolaris	tuberosus	spp.	spp.
COMM_NAME		Common Sunflower	Silverleaf Sunflower	Texas Blueweed	Serpentine Sunflower	Puzzle Sunflower	Prairie Sunflower	Jerusalem Artichoke	---	---
INTER_SPEC		---	---	---	---	---	---	---	annuus argophyllus ciliaris exilis paradoxus petiolaris tuberosus	annuus argophyllus ciliaris exilis paradoxus petiolaris tuberosus
COMMENTS		EST sequences from several different strains/cultivars	---	---	---	---	---	---	assembly of the assemblies of 7 Helianthus species	assembly of the CDS regions only (EST fragments with homology to known plant genes)
CAP3_PARAM		-o 80 -p 90	-o 80 -p 90	-o 80 -p 90	-o 80 -p 90	-o 80 -p 90	-o 80 -p 90	-o 80 -p 90	-o 80 -p 90	-o 80 -p 90
N_SEQS/ESTs		93428	35702	21589	33958	30503	27472	40361	136935	144746
N_UNIGENES		31605	17839	14857	19784	17874	12982	21994	81726	32272
N_CONTIGS		10796	5592	3979	6279	4765	4450	7156	28606	17041
ATH_HITS%		57	72	80.5	77.4	72.7	70	78.6	-1	-1
UCO_FRACT		0.66	0.6	0.68	0.7	0.64	0.46	0.76	0.99	-1
SEQs_FILE		Download File	Download File	Download File	Download File	Download File	Download File	Download File	Download File	Download File
ASSEMBLY_FILE		Download File	Download File	Download File	Download File	Download File	Download File	Download File	Download File	Download File
CONTIG_INFO		Download File	Download File	Download File	Download File	Download File	Download File	Download File	Download File	Download File
CAP3_ALIGNMENTS		Download File	Download File	Download File	Download File	Download File	Download File	Download File	Download File	Download File
ATH_BLAST_INFO_BEST_HIT		Download File	Download File	Download File	Download File	Download File	Download File	Download File	Download File	Download File